BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B05LP1|AL426470
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig276 1593 0.0
>3x_Contig276
Length = 1075
Score = 1593 bits (803), Expect = 0.0
Identities = 815/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Plus
Query: 1 gatccttactcttattggatttccatgtcacatccttcttagcaagtttccgctctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gatccttactcttattggatttccatgtcacatccttcttagcaagtttccgctctttcc 308
Query: 61 tatgttgagcagcagccttcttcttgataccctccttcatacgagtngaagttctcttgg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 309 tatgttgagcagcagccttcttcttgataccctccttcatacgagtggaagttctcttgg 368
Query: 121 aagttctctttcttactctcaccatctcttttgattaatggaaaaaggtatatttactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aagttctctttcttactctcaccatctcttttgattaatggaaaaaggtatatttactgc 428
Query: 181 actggattatagatatcttagctgttccggtgaacttatcacggaaaacagtactgaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actggattatagatatcttagctgttccggtgaacttatcacggaaaacagtactgaaac 488
Query: 241 atctacttgaacaggtgttctgtaaatatcaagtctcatctcatctcatctcatctcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atctacttgaacaggtgttctgtaaatatcaagtctcatctcatctcatctcatctcatc 548
Query: 301 gcaggttttaacatatttcgaagagctgaaaaatttcaaagtagaaaagaatttcttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcaggttttaacatatttcgaagagctgaaaaatttcaaagtagaaaagaatttcttttt 608
Query: 361 gctggcggacgacagtggaaacacagtggatactcgtcaattacgaggcaatcttatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctggcggacgacagtggaaacacagtggatactcgtcaattacgaggcaatcttatgct 668
Query: 421 actcgcaagccataatttgtgtcaataatatttgggacgtatttggtatatctatgagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 actcgcaagccataatttgtgtcaataatatttgggacgtatttggtatatctatgagca 728
Query: 481 cttccaggcagatatttaacattatatatacagtaataccgtcaagggcagtgaaactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cttccaggcagatatttaacattatatatacagtaataccgtcaagggcagtgaaactgt 788
Query: 541 cagtacatataaaggcagcccagtagccgttgcgcagttttttttgacactagcagggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cagtacatataaaggcagcccagtagccgttgcgcagttttttttgacactagcagggaa 848
Query: 601 caaaaatcatctcagtaataagaactgatataacgtgatatacgatacgaagttgcgagg 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 849 caaaaatcatctcagtaataagaactgatataacgtgatatacgatacg-agttgcgagg 907
Query: 661 gtggaacttgttttaccacatctctcatcctctctacttccagtcagtgtagtaataact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gtggaacttgttttaccacatctctcatcctctctacttccagtcagtgtagtaataact 967
Query: 721 gcgaagttattacttgttacccggatctcgtgaaaattttcatcaaccgtaaacaagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 gcgaagttattacttgttacccggatctcgtgaaaattttcatcaaccgtaaacaagaga 1027
Query: 781 catgccacggttgtttctgtggcgtttatcacgtgata 818
|||||||||| |||||||||||||||||||||||||||
Sbjct: 1028 catgccacgggtgtttctgtggcgtttatcacgtgata 1065
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7920
Number of Sequences: 1807
Number of extensions: 7920
Number of successful extensions: 671
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)